Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Ighv1-17-201ENSMUST00000194435 350 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm3103-201ENSMUST00000198073 752 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm5001-201ENSMUST00000204361 331 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm8290-201ENSMUST00000218202 477 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm8137-201ENSMUST00000218997 463 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Zfp874a-208ENSMUST00000225479 1092 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 AC154283.1-201ENSMUST00000228417 389 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Mir365-2-201ENSMUST00000083555 112 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm12258-201ENSMUST00000093768 2524 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm13414-201ENSMUST00000117516 727 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm25164-201ENSMUST00000158908 116 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm20797-201ENSMUST00000177894 383 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Mir7j-201ENSMUST00000184427 122 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm7436-201ENSMUST00000187229 391 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm5252-201ENSMUST00000189030 909 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm18407-201ENSMUST00000192126 790 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm33626-201ENSMUST00000206790 828 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 AC152940.1-201ENSMUST00000226504 139 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 AC121114.1-201ENSMUST00000228522 570 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Gm5250-201ENSMUST00000059065 321 ntBASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim47Q8C0E3 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms