Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Usp40Q8BWR4 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm37518-201ENSMUST00000194930 2603 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm43876-201ENSMUST00000203831 3229 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm25117-201ENSMUST00000157194 144 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm26162-201ENSMUST00000157793 132 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm10177-201ENSMUST00000160052 444 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm17063-201ENSMUST00000168135 456 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm8524-201ENSMUST00000186232 379 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm37493-201ENSMUST00000193167 433 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm37973-201ENSMUST00000195767 1289 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm44361-201ENSMUST00000197960 94 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 AC113031.1-201ENSMUST00000227400 432 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Usp40Q8BWR4 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm28112-201ENSMUST00000190898 1875 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm14018-201ENSMUST00000119042 455 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm15158-201ENSMUST00000120577 570 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm23673-201ENSMUST00000157474 298 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm17137-202ENSMUST00000165729 957 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 AC104906.1-201ENSMUST00000218122 913 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 AC154861.1-201ENSMUST00000223767 800 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 AC140368.1-202ENSMUST00000226131 658 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Usp40Q8BWR4 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm11256-201ENSMUST00000118109 829 ntBASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms