Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm3650-201ENSMUST00000180600 747 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm27005-201ENSMUST00000182783 921 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm43850-201ENSMUST00000202021 578 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm43501-201ENSMUST00000202513 107 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm18914-201ENSMUST00000214625 616 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 AC121804.1-201ENSMUST00000221016 394 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 AC122924.1-201ENSMUST00000222044 163 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 AC164883.2-201ENSMUST00000227931 3815 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm28240-201ENSMUST00000187560 2053 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Snora35-201ENSMUST00000104579 128 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm14712-201ENSMUST00000120195 772 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm24382-201ENSMUST00000122698 107 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm18191-201ENSMUST00000174624 824 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm25246-201ENSMUST00000175476 69 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm6931-201ENSMUST00000183103 371 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Mir6971-201ENSMUST00000183497 63 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm27210-201ENSMUST00000184263 402 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Ighv1-10-201ENSMUST00000194372 355 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm43725-201ENSMUST00000200122 369 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm7499-201ENSMUST00000210423 813 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm45878-201ENSMUST00000211839 241 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm10221-201ENSMUST00000088299 309 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.78□□□□□ -1.16
Ddx55Q6ZPL9 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Ddx55Q6ZPL9 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.77□□□□□ -1.16
Ddx55Q6ZPL9 Gm2065-201ENSMUST00000194697 2757 ntBASIC7.77□□□□□ -1.16
Ddx55Q6ZPL9 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
Ddx55Q6ZPL9 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm12447-201ENSMUST00000119110 470 ntBASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm8582-201ENSMUST00000164061 789 ntBASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm2058-201ENSMUST00000178791 560 ntBASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Ddx55Q6ZPL9 Gm27152-201ENSMUST00000183828 99 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms