Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.03□□□□□ -1.28
Scaf4Q6PFF0 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Scaf4Q6PFF0 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.02□□□□□ -1.28
Scaf4Q6PFF0 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm23497-201ENSMUST00000157738 130 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm7031-201ENSMUST00000173709 919 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm29513-201ENSMUST00000185741 202 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm38166-201ENSMUST00000191660 471 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm8826-201ENSMUST00000193161 948 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm37225-201ENSMUST00000193423 325 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm43382-201ENSMUST00000198954 838 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm7542-201ENSMUST00000201140 777 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm44243-201ENSMUST00000204323 692 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 AC154738.1-201ENSMUST00000227054 368 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf4Q6PFF0 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 AC134860.3-201ENSMUST00000223564 1300 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm25608-201ENSMUST00000104021 132 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm4911-201ENSMUST00000119388 945 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm13038-201ENSMUST00000119886 459 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm14065-201ENSMUST00000120848 585 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm9890-201ENSMUST00000171867 537 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm9149-201ENSMUST00000182724 1007 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Mir6930-201ENSMUST00000183859 68 ntBASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scaf4Q6PFF0 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms