Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm9088-201ENSMUST00000220237 508 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm7986-201ENSMUST00000221336 551 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 AC124516.1-201ENSMUST00000221845 3544 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm25795-201ENSMUST00000104421 132 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm13641-201ENSMUST00000117993 473 ntBASIC7.73□□□□□ -1.17
Nup98Q6PFD9 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup98Q6PFD9 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm7058-201ENSMUST00000119209 902 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm11498-201ENSMUST00000120660 949 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm22599-201ENSMUST00000157597 132 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm16557-201ENSMUST00000159182 191 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Mir6973b-201ENSMUST00000184185 80 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm37463-201ENSMUST00000193819 796 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 C78859-201ENSMUST00000212800 5943 ntBASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Nup98Q6PFD9 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Gm14158-201ENSMUST00000118409 308 ntBASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Gm13772-201ENSMUST00000118431 317 ntBASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Gm22701-201ENSMUST00000175371 291 ntBASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7.71□□□□□ -1.17
Nup98Q6PFD9 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Gm45196-201ENSMUST00000206751 825 ntBASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.71□□□□□ -1.17
Nup98Q6PFD9 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms