Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Gm42772-201ENSMUST00000199945 3041 ntBASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Gm2223-201ENSMUST00000112099 1350 ntBASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sf3b2Q3UJB0 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm9519-201ENSMUST00000206108 1337 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm13114-201ENSMUST00000117605 106 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm12768-201ENSMUST00000120055 759 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm22132-201ENSMUST00000175316 100 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm18805-201ENSMUST00000206872 655 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 AC153870.1-201ENSMUST00000219599 560 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm2139-201ENSMUST00000222569 1075 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 AC164618.3-201ENSMUST00000224863 681 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Mir134-201ENSMUST00000083492 71 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 n-R5s58-201ENSMUST00000093682 119 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Gm37956-201ENSMUST00000195208 2010 ntBASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sf3b2Q3UJB0 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm43880-201ENSMUST00000203635 2162 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm10555-201ENSMUST00000193178 1791 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm42685-201ENSMUST00000200378 2390 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm3008-201ENSMUST00000160566 571 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm20615-201ENSMUST00000177503 705 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm18447-201ENSMUST00000187501 307 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm43084-201ENSMUST00000200696 947 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm5886-202ENSMUST00000203957 522 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm8058-201ENSMUST00000217247 587 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 AC139197.1-201ENSMUST00000228332 813 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Gm7134-201ENSMUST00000122296 2406 ntBASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Sf3b2Q3UJB0 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms