Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm38099-201ENSMUST00000193280 3170 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm8107-201ENSMUST00000117477 2009 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 AC105958.1-201ENSMUST00000214783 2144 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm11649-201ENSMUST00000118214 375 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm2318-201ENSMUST00000119623 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm11891-201ENSMUST00000121241 619 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm12175-201ENSMUST00000122081 345 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm24498-201ENSMUST00000158445 102 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm7438-201ENSMUST00000177664 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm7408-201ENSMUST00000178014 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm7386-201ENSMUST00000178020 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm3657-201ENSMUST00000178170 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm7415-201ENSMUST00000178205 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm7398-201ENSMUST00000178589 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm7391-201ENSMUST00000178680 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm7375-201ENSMUST00000179232 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm3681-201ENSMUST00000179940 639 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Mir7033-201ENSMUST00000184259 81 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm29513-201ENSMUST00000185741 202 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm28996-201ENSMUST00000190316 721 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm37177-201ENSMUST00000193768 417 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm43390-201ENSMUST00000196614 421 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm44243-201ENSMUST00000204323 692 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm45478-201ENSMUST00000209472 211 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.28□□□□□ -1.4
Col8a1Q00780 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 AC163651.1-201ENSMUST00000222500 372 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Olfr687-201ENSMUST00000098154 938 ntBASIC6.28□□□□□ -1.4
Col8a1Q00780 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm15109-201ENSMUST00000133085 2026 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms