Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1bP97952 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Scn1bP97952 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1bP97952 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1bP97952 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1bP97952 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1bP97952 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.1□□□□□ -1.43
Scn1bP97952 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.1□□□□□ -1.43
Scn1bP97952 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.1□□□□□ -1.43
Scn1bP97952 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.09□□□□□ -1.43
Scn1bP97952 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.09□□□□□ -1.43
Scn1bP97952 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Scn1bP97952 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Scn1bP97952 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Scn1bP97952 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Gm5605-201ENSMUST00000208940 1305 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Scn1bP97952 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.09□□□□□ -1.43
Scn1bP97952 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.09□□□□□ -1.43
Scn1bP97952 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm25843-201ENSMUST00000122582 314 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm22214-201ENSMUST00000157563 172 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm22882-201ENSMUST00000157749 124 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm22361-201ENSMUST00000158435 176 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Gm17973-201ENSMUST00000174509 520 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm27782-201ENSMUST00000185059 199 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm18183-201ENSMUST00000191024 615 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.09□□□□□ -1.43
Scn1bP97952 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm43590-201ENSMUST00000195987 387 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm44225-201ENSMUST00000203582 186 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.09□□□□□ -1.43
Scn1bP97952 Gm44705-201ENSMUST00000206719 339 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Scn1bP97952 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC6.09□□□□□ -1.43
Scn1bP97952 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.09□□□□□ -1.43
Scn1bP97952 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scn1bP97952 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scn1bP97952 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scn1bP97952 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Scn1bP97952 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Scn1bP97952 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.09□□□□□ -1.44
Scn1bP97952 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Scn1bP97952 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Scn1bP97952 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.08□□□□□ -1.44
Scn1bP97952 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Scn1bP97952 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm12344-201ENSMUST00000117087 329 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm11880-201ENSMUST00000117612 399 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm13222-201ENSMUST00000119638 138 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm13163-201ENSMUST00000119875 336 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm11689-201ENSMUST00000120766 302 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm15644-201ENSMUST00000121764 387 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm6081-201ENSMUST00000134472 489 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Scn1bP97952 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm5181-201ENSMUST00000183140 971 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm6610-201ENSMUST00000186324 358 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Scn1bP97952 Trbv27-201ENSMUST00000193711 277 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm37436-201ENSMUST00000193842 1085 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms