Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm22953-201ENSMUST00000116724 101 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm14375-201ENSMUST00000119490 855 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm2986-201ENSMUST00000121603 382 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm43725-201ENSMUST00000200122 369 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm44111-201ENSMUST00000204649 399 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gm17849-201ENSMUST00000219788 853 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC5.84□□□□□ -1.47
Nkx3-1P97436 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx3-1P97436 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Nkx3-1P97436 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Nkx3-1P97436 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Nkx3-1P97436 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm14762-201ENSMUST00000105109 1771 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm13983-201ENSMUST00000118018 865 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm15149-201ENSMUST00000119370 360 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm24383-201ENSMUST00000122691 333 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm23674-201ENSMUST00000157473 131 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm23386-201ENSMUST00000158585 144 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm25675-201ENSMUST00000174979 118 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Mir199b-201ENSMUST00000175066 110 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm18849-201ENSMUST00000189861 560 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm7463-201ENSMUST00000201541 547 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm17950-201ENSMUST00000214617 646 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 AL929555.1-201ENSMUST00000215283 509 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 AC150661.1-201ENSMUST00000222563 495 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm9315-201ENSMUST00000222696 908 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm37906-201ENSMUST00000192050 3035 ntBASIC5.83□□□□□ -1.48
Nkx3-1P97436 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx3-1P97436 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms