Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Lsm6P62313 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Lsm6P62313 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Lsm6P62313 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Lsm6P62313 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Gm13141-201ENSMUST00000117417 456 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Gm13732-201ENSMUST00000117753 535 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC5.87□□□□□ -1.47
Lsm6P62313 Gm22533-201ENSMUST00000158821 274 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Lsm6P62313 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC5.87□□□□□ -1.47
Lsm6P62313 Mir6337-201ENSMUST00000184194 105 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Gm27970-201ENSMUST00000184854 407 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Lsm6P62313 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Gm20136-201ENSMUST00000207501 891 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Gm17997-201ENSMUST00000211801 840 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC5.87□□□□□ -1.47
Lsm6P62313 AC153847.1-201ENSMUST00000214524 353 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC5.87□□□□□ -1.47
Lsm6P62313 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.87□□□□□ -1.47
Lsm6P62313 AC131117.2-202ENSMUST00000224539 547 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 AC106830.2-201ENSMUST00000226624 943 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 CT009515.1-201ENSMUST00000228127 586 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Gm6887-201ENSMUST00000080945 482 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Gm5446-201ENSMUST00000091762 784 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Lsm6P62313 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.87□□□□□ -1.47
Lsm6P62313 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.87□□□□□ -1.47
Lsm6P62313 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lsm6P62313 AU020206-202ENSMUST00000206358 3009 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.87□□□□□ -1.47
Lsm6P62313 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Lsm6P62313 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Lsm6P62313 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC5.86□□□□□ -1.47
Lsm6P62313 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.86□□□□□ -1.47
Lsm6P62313 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm6327-201ENSMUST00000171185 1335 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm12135-201ENSMUST00000119170 466 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm11498-201ENSMUST00000120660 949 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm23077-201ENSMUST00000157854 116 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm3585-201ENSMUST00000173438 875 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm22569-201ENSMUST00000175545 124 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm20691-201ENSMUST00000176889 333 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm27360-201ENSMUST00000183487 80 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.86□□□□□ -1.47
Lsm6P62313 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm6P62313 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm44342-201ENSMUST00000196874 129 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm44383-201ENSMUST00000198940 129 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm43089-201ENSMUST00000199162 275 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Lsm6P62313 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm19092-201ENSMUST00000209036 969 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm45279-201ENSMUST00000210315 391 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Lsm6P62313 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.86□□□□□ -1.47
Lsm6P62313 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Gm35619-201ENSMUST00000222548 600 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 CT009495.1-201ENSMUST00000224221 862 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 AC131029.2-203ENSMUST00000228116 1244 ntBASIC5.86□□□□□ -1.47
Lsm6P62313 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lsm6P62313 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms