Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.62□□□□□ -1.19
Sox1P53783 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Gm4725-201ENSMUST00000151048 587 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Gm3102-201ENSMUST00000164236 489 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm17064-201ENSMUST00000167690 452 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm3208-201ENSMUST00000168281 427 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Gm27210-201ENSMUST00000184263 402 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm28353-201ENSMUST00000186482 570 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm28533-201ENSMUST00000186741 570 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC7.62□□□□□ -1.19
Sox1P53783 Gm29238-201ENSMUST00000189709 695 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Gm17952-201ENSMUST00000193914 747 ntBASIC7.62□□□□□ -1.19
Sox1P53783 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Gm18150-201ENSMUST00000195341 645 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm8891-201ENSMUST00000198546 832 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm38395-201ENSMUST00000199904 830 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm8930-201ENSMUST00000201693 768 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC7.62□□□□□ -1.19
Sox1P53783 AC153957.1-201ENSMUST00000215235 229 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm18040-201ENSMUST00000217922 827 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Gm45965-201ENSMUST00000221192 1284 ntBASIC7.62□□□□□ -1.19
Sox1P53783 AC113031.6-202ENSMUST00000228468 1145 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Sox1P53783 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Sox1P53783 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Sox1P53783 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Sox1P53783 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Sox1P53783 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Sox1P53783 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Sox1P53783 Gm232-201ENSMUST00000216549 2559 ntBASIC7.62□□□□□ -1.19
Sox1P53783 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Sox1P53783 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Mir546-201ENSMUST00000102105 121 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Gm25785-201ENSMUST00000104129 125 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.61□□□□□ -1.19
Sox1P53783 Gm14990-201ENSMUST00000122354 445 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 Gm23229-201ENSMUST00000157297 105 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Gm23756-201ENSMUST00000157582 114 ntBASIC7.61□□□□□ -1.19
Sox1P53783 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Gm15508-201ENSMUST00000160330 325 ntBASIC7.61□□□□□ -1.19
Sox1P53783 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC7.61□□□□□ -1.19
Sox1P53783 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Gm18006-201ENSMUST00000177411 662 ntBASIC7.61□□□□□ -1.19
Sox1P53783 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.61□□□□□ -1.19
Sox1P53783 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Sox1P53783 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Sox1P53783 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC7.61□□□□□ -1.19
Sox1P53783 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.61□□□□□ -1.19
Sox1P53783 Gm8209-201ENSMUST00000206386 553 ntBASIC7.61□□□□□ -1.19
Sox1P53783 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7.61□□□□□ -1.19
Sox1P53783 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC7.61□□□□□ -1.19
Sox1P53783 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Sox1P53783 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Sox1P53783 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.61□□□□□ -1.19
Sox1P53783 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Sox1P53783 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms