Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm17834-201ENSMUST00000204322 891 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Gm44896-201ENSMUST00000206190 772 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.24□□□□□ -1.25
Shmt1P50431 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.24□□□□□ -1.25
Shmt1P50431 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.24□□□□□ -1.25
Shmt1P50431 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Shmt1P50431 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Shmt1P50431 Gm29486-201ENSMUST00000088648 372 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Shmt1P50431 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
Shmt1P50431 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Shmt1P50431 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC7.23□□□□□ -1.25
Shmt1P50431 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Gm12939-201ENSMUST00000117303 165 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.23□□□□□ -1.25
Shmt1P50431 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.23□□□□□ -1.25
Shmt1P50431 Gm25332-201ENSMUST00000158038 105 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Shmt1P50431 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Shmt1P50431 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Gm28766-201ENSMUST00000191086 234 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Gm37072-201ENSMUST00000194570 837 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC7.23□□□□□ -1.25
Shmt1P50431 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Shmt1P50431 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Gm7351-201ENSMUST00000210745 580 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC7.23□□□□□ -1.25
Shmt1P50431 Gm18040-201ENSMUST00000217922 827 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Shmt1P50431 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Shmt1P50431 Mir106b-201ENSMUST00000083580 82 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Shmt1P50431 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Shmt1P50431 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Shmt1P50431 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.23□□□□□ -1.25
Shmt1P50431 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Shmt1P50431 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Mir706-201ENSMUST00000102262 84 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm11501-201ENSMUST00000118039 581 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm14833-201ENSMUST00000118345 1027 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm13930-201ENSMUST00000118569 368 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms