Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SftpbP50405 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SftpbP50405 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SftpbP50405 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SftpbP50405 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SftpbP50405 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
SftpbP50405 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SftpbP50405 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SftpbP50405 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SftpbP50405 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SftpbP50405 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SftpbP50405 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SftpbP50405 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Gm25760-201ENSMUST00000103989 132 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm25631-201ENSMUST00000104390 130 ntBASIC6.67□□□□□ -1.34
SftpbP50405 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SftpbP50405 Gm14584-201ENSMUST00000118956 637 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm14631-201ENSMUST00000119067 594 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm14038-201ENSMUST00000121500 807 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm14728-201ENSMUST00000122196 492 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm10157-201ENSMUST00000139408 343 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm11545-201ENSMUST00000146507 375 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Gm16138-201ENSMUST00000159341 821 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm23810-201ENSMUST00000175150 74 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm27970-201ENSMUST00000184854 407 ntBASIC6.67□□□□□ -1.34
SftpbP50405 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.67□□□□□ -1.34
SftpbP50405 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Gm36965-201ENSMUST00000193797 394 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.67□□□□□ -1.34
SftpbP50405 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.67□□□□□ -1.34
SftpbP50405 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.67□□□□□ -1.34
SftpbP50405 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.67□□□□□ -1.34
SftpbP50405 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.67□□□□□ -1.34
SftpbP50405 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.67□□□□□ -1.34
SftpbP50405 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.67□□□□□ -1.34
SftpbP50405 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Gm15500-201ENSMUST00000071523 894 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SftpbP50405 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm6166-201ENSMUST00000098689 409 ntBASIC6.67□□□□□ -1.34
SftpbP50405 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SftpbP50405 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.67□□□□□ -1.34
SftpbP50405 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SftpbP50405 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.67□□□□□ -1.34
SftpbP50405 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.66□□□□□ -1.34
SftpbP50405 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SftpbP50405 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.66□□□□□ -1.34
SftpbP50405 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 Gm14755-201ENSMUST00000118037 384 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.66□□□□□ -1.34
SftpbP50405 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.66□□□□□ -1.34
SftpbP50405 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SftpbP50405 Gm9114-201ENSMUST00000188558 997 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Gm18875-201ENSMUST00000188563 882 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Gm29160-201ENSMUST00000190094 699 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.66□□□□□ -1.34
SftpbP50405 Gm42804-201ENSMUST00000199701 178 ntBASIC6.66□□□□□ -1.34
SftpbP50405 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.66□□□□□ -1.34
SftpbP50405 Gm32899-201ENSMUST00000219694 207 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SftpbP50405 Gm21731-201ENSMUST00000079524 489 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
SftpbP50405 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SftpbP50405 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.66□□□□□ -1.34
SftpbP50405 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.66□□□□□ -1.34
SftpbP50405 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SftpbP50405 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SftpbP50405 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.66□□□□□ -1.34
SftpbP50405 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
SftpbP50405 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms