Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sox6P40645 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm14729-201ENSMUST00000118373 689 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Gm16113-201ENSMUST00000159629 372 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm17217-201ENSMUST00000166613 469 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm19815-201ENSMUST00000175818 335 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Gm26570-201ENSMUST00000180672 342 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Gm29496-201ENSMUST00000189854 693 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm44253-201ENSMUST00000203387 628 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm44111-201ENSMUST00000204649 399 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.22□□□□□ -1.41
Sox6P40645 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Gm45725-201ENSMUST00000212962 337 ntBASIC6.22□□□□□ -1.41
Sox6P40645 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Gm8275-201ENSMUST00000219732 424 ntBASIC6.22□□□□□ -1.41
Sox6P40645 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sox6P40645 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sox6P40645 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sox6P40645 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Gm25587-201ENSMUST00000082498 166 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sox6P40645 Gm7731-201ENSMUST00000091759 470 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.22□□□□□ -1.41
Sox6P40645 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox6P40645 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.22□□□□□ -1.41
Sox6P40645 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox6P40645 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Sox6P40645 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Sox6P40645 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Sox6P40645 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Sox6P40645 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Sox6P40645 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Sox6P40645 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.21□□□□□ -1.41
Sox6P40645 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.21□□□□□ -1.41
Sox6P40645 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Sox6P40645 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Sox6P40645 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Sox6P40645 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Sox6P40645 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sox6P40645 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.21□□□□□ -1.42
Sox6P40645 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.21□□□□□ -1.42
Sox6P40645 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Sox6P40645 Gm11858-201ENSMUST00000117935 838 ntBASIC6.21□□□□□ -1.42
Sox6P40645 Gm13754-201ENSMUST00000120486 998 ntBASIC6.21□□□□□ -1.42
Sox6P40645 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sox6P40645 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox6P40645 Gm16138-201ENSMUST00000159341 821 ntBASIC6.21□□□□□ -1.42
Sox6P40645 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox6P40645 Gm27014-201ENSMUST00000182658 937 ntBASIC6.21□□□□□ -1.42
Sox6P40645 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.21□□□□□ -1.42
Sox6P40645 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox6P40645 Gm43157-201ENSMUST00000198223 412 ntBASIC6.21□□□□□ -1.42
Sox6P40645 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.21□□□□□ -1.42
Sox6P40645 Gm45070-201ENSMUST00000208100 246 ntBASIC6.21□□□□□ -1.42
Sox6P40645 Gm9652-201ENSMUST00000209345 163 ntBASIC6.21□□□□□ -1.42
Sox6P40645 Gm2767-201ENSMUST00000209582 473 ntBASIC6.21□□□□□ -1.42
Sox6P40645 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.21□□□□□ -1.42
Sox6P40645 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.21□□□□□ -1.42
Sox6P40645 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Sox6P40645 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sox6P40645 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sox6P40645 Gm6166-201ENSMUST00000098689 409 ntBASIC6.21□□□□□ -1.42
Sox6P40645 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sox6P40645 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sox6P40645 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sox6P40645 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sox6P40645 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sox6P40645 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.21□□□□□ -1.42
Sox6P40645 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox6P40645 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox6P40645 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sox6P40645 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sox6P40645 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms