Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm20691-201ENSMUST00000176889 333 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm37203-201ENSMUST00000191618 385 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm37187-201ENSMUST00000193425 341 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 BC049739-201ENSMUST00000202626 660 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.92□□□□□ -1.3
Cxcl12P40224 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm18914-201ENSMUST00000214625 616 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm6056-201ENSMUST00000221253 488 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.92□□□□□ -1.3
Cxcl12P40224 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Cxcl12P40224 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC6.91□□□□□ -1.3
Cxcl12P40224 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Cxcl12P40224 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Mir466j-201ENSMUST00000116876 122 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm15078-201ENSMUST00000118371 782 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm15568-201ENSMUST00000118589 1213 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm14805-201ENSMUST00000120172 340 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm8582-201ENSMUST00000164061 789 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm2539-203ENSMUST00000181352 746 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm38181-201ENSMUST00000181357 720 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm28080-201ENSMUST00000188552 722 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm44902-201ENSMUST00000206177 805 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.91□□□□□ -1.3
Cxcl12P40224 Gm4012-201ENSMUST00000221504 581 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.91□□□□□ -1.3
Cxcl12P40224 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Cxcl12P40224 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cxcl12P40224 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Cxcl12P40224 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Cxcl12P40224 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC6.9□□□□□ -1.3
Cxcl12P40224 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.9□□□□□ -1.3
Cxcl12P40224 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm38386-201ENSMUST00000194293 3421 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Cxcl12P40224 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm23440-201ENSMUST00000104299 130 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm16248-201ENSMUST00000124238 243 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm5853-201ENSMUST00000197183 632 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.9□□□□□ -1.3
Cxcl12P40224 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm8256-203ENSMUST00000228692 591 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Cxcl12P40224 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Cxcl12P40224 Gm5841-201ENSMUST00000195307 2177 ntBASIC6.9□□□□□ -1.3
Cxcl12P40224 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms