Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Traf1P39428 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC7.86□□□□□ -1.15
Traf1P39428 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm23748-201ENSMUST00000104227 131 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm13137-201ENSMUST00000118035 345 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Gm15349-201ENSMUST00000121154 204 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Gm15096-201ENSMUST00000121918 878 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm22523-201ENSMUST00000158696 100 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.86□□□□□ -1.15
Traf1P39428 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC7.86□□□□□ -1.15
Traf1P39428 Gm18752-201ENSMUST00000192876 608 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Gm7804-202ENSMUST00000194187 854 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Gm43048-201ENSMUST00000196101 388 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm20128-201ENSMUST00000196189 417 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Traf1P39428 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.86□□□□□ -1.15
Traf1P39428 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.86□□□□□ -1.15
Traf1P39428 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Traf1P39428 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Traf1P39428 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.86□□□□□ -1.15
Traf1P39428 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Traf1P39428 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Traf1P39428 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.86□□□□□ -1.15
Traf1P39428 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
Traf1P39428 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
Traf1P39428 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Traf1P39428 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Gm37541-201ENSMUST00000192464 2315 ntBASIC7.85□□□□□ -1.15
Traf1P39428 AU020206-202ENSMUST00000206358 3009 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.85□□□□□ -1.15
Traf1P39428 Gm26340-201ENSMUST00000102365 99 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
Traf1P39428 Gm12369-201ENSMUST00000121343 942 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.85□□□□□ -1.15
Traf1P39428 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Gm23810-201ENSMUST00000175150 74 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Gm24812-201ENSMUST00000175315 284 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Gm27299-201ENSMUST00000184593 103 ntBASIC7.85□□□□□ -1.15
Traf1P39428 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.85□□□□□ -1.15
Traf1P39428 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.85□□□□□ -1.15
Traf1P39428 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
Traf1P39428 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.85□□□□□ -1.15
Traf1P39428 AC133203.1-201ENSMUST00000228241 301 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Traf1P39428 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.85□□□□□ -1.15
Traf1P39428 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms