Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Gm43489-201ENSMUST00000196810 993 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm42438-201ENSMUST00000197832 974 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Gm6477-201ENSMUST00000217098 764 ntBASIC8.81□□□□□ -1
Col18a1P39061 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 AC116591.1-201ENSMUST00000227919 351 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Col18a1P39061 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.8□□□□□ -1
Col18a1P39061 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 Gm18310-201ENSMUST00000206494 3912 ntBASIC8.8□□□□□ -1
Col18a1P39061 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Col18a1P39061 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC8.8□□□□□ -1
Col18a1P39061 Gm38077-201ENSMUST00000193657 3245 ntBASIC8.8□□□□□ -1
Col18a1P39061 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.8□□□□□ -1
Col18a1P39061 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC8.8□□□□□ -1
Col18a1P39061 Gm12229-201ENSMUST00000120487 468 ntBASIC8.8□□□□□ -1
Col18a1P39061 Gm13998-201ENSMUST00000120952 335 ntBASIC8.8□□□□□ -1
Col18a1P39061 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC8.8□□□□□ -1
Col18a1P39061 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC8.8□□□□□ -1
Col18a1P39061 Gm18833-201ENSMUST00000173218 862 ntBASIC8.8□□□□□ -1
Col18a1P39061 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC8.8□□□□□ -1
Col18a1P39061 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC8.8□□□□□ -1
Col18a1P39061 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC8.8□□□□□ -1
Col18a1P39061 Gm29454-201ENSMUST00000190805 393 ntBASIC8.8□□□□□ -1
Col18a1P39061 Gm37235-201ENSMUST00000195171 59 ntBASIC8.8□□□□□ -1
Col18a1P39061 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC8.8□□□□□ -1
Col18a1P39061 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC8.8□□□□□ -1
Col18a1P39061 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC8.8□□□□□ -1
Col18a1P39061 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC8.8□□□□□ -1
Col18a1P39061 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC8.8□□□□□ -1
Col18a1P39061 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC8.8□□□□□ -1
Col18a1P39061 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC8.8□□□□□ -1
Col18a1P39061 Gm37706-201ENSMUST00000195379 2765 ntBASIC8.8□□□□□ -1
Col18a1P39061 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
Col18a1P39061 Gm37864-201ENSMUST00000195308 3075 ntBASIC8.8□□□□□ -1
Col18a1P39061 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.8□□□□□ -1
Col18a1P39061 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.8□□□□□ -1
Col18a1P39061 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col18a1P39061 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Col18a1P39061 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Col18a1P39061 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Col18a1P39061 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Gm16423-201ENSMUST00000120078 947 ntBASIC8.79□□□□□ -1
Col18a1P39061 Gm11510-201ENSMUST00000120278 347 ntBASIC8.79□□□□□ -1
Col18a1P39061 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Col18a1P39061 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Gm23050-201ENSMUST00000158775 165 ntBASIC8.79□□□□□ -1
Col18a1P39061 Gm16285-201ENSMUST00000162999 347 ntBASIC8.79□□□□□ -1
Col18a1P39061 Gm26057-201ENSMUST00000178099 165 ntBASIC8.79□□□□□ -1
Col18a1P39061 Gm3650-201ENSMUST00000180600 747 ntBASIC8.79□□□□□ -1
Col18a1P39061 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.79□□□□□ -1
Col18a1P39061 Mir6367-201ENSMUST00000183385 102 ntBASIC8.79□□□□□ -1
Col18a1P39061 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.79□□□□□ -1
Col18a1P39061 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.79□□□□□ -1
Col18a1P39061 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC8.79□□□□□ -1
Col18a1P39061 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 AC154806.5-205ENSMUST00000228828 411 ntBASIC8.79□□□□□ -1
Col18a1P39061 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col18a1P39061 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col18a1P39061 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC8.79□□□□□ -1
Col18a1P39061 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC8.79□□□□□ -1
Col18a1P39061 Gm42507-201ENSMUST00000201187 2555 ntBASIC8.79□□□□□ -1
Col18a1P39061 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Col18a1P39061 Gm43187-201ENSMUST00000200652 2397 ntBASIC8.79□□□□□ -1
Col18a1P39061 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Gm43981-201ENSMUST00000203285 1467 ntBASIC8.79□□□□□ -1
Col18a1P39061 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col18a1P39061 Gm22952-201ENSMUST00000116720 120 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm14356-201ENSMUST00000118322 869 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm12396-201ENSMUST00000121600 306 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm25295-201ENSMUST00000122794 306 ntBASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms