Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm11318-201ENSMUST00000118640 961 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm11850-201ENSMUST00000119679 479 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm22600-201ENSMUST00000157598 269 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.32□□□□□ -1.24
Usp4P35123 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC7.32□□□□□ -1.24
Usp4P35123 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm20690-201ENSMUST00000177341 315 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm26179-201ENSMUST00000177723 132 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm24300-201ENSMUST00000177809 109 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm24017-201ENSMUST00000178726 109 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm22254-201ENSMUST00000179186 110 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm23952-201ENSMUST00000179380 109 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.32□□□□□ -1.24
Usp4P35123 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Gm18848-201ENSMUST00000182069 792 ntBASIC7.32□□□□□ -1.24
Usp4P35123 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.32□□□□□ -1.24
Usp4P35123 Ighv5-5-201ENSMUST00000193826 329 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm37560-201ENSMUST00000194289 1000 ntBASIC7.32□□□□□ -1.24
Usp4P35123 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm42593-201ENSMUST00000198469 377 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm43243-201ENSMUST00000199964 278 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC7.32□□□□□ -1.24
Usp4P35123 Gm44931-201ENSMUST00000206056 545 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm18559-201ENSMUST00000208249 604 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Usp4P35123 Gm36758-201ENSMUST00000222594 310 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Gm9315-201ENSMUST00000222696 908 ntBASIC7.32□□□□□ -1.24
Usp4P35123 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.32□□□□□ -1.24
Usp4P35123 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.32□□□□□ -1.24
Usp4P35123 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.32□□□□□ -1.24
Usp4P35123 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Usp4P35123 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Usp4P35123 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Usp4P35123 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.32□□□□□ -1.24
Usp4P35123 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.32□□□□□ -1.24
Usp4P35123 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC7.32□□□□□ -1.24
Usp4P35123 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.32□□□□□ -1.24
Usp4P35123 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp4P35123 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
Usp4P35123 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Usp4P35123 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Usp4P35123 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Usp4P35123 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.31□□□□□ -1.24
Usp4P35123 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Usp4P35123 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.31□□□□□ -1.24
Usp4P35123 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Gm25757-201ENSMUST00000103986 123 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Gm23323-201ENSMUST00000104471 133 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Usp4P35123 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Gm13878-201ENSMUST00000117986 577 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Gm13930-201ENSMUST00000118569 368 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC7.31□□□□□ -1.24
Usp4P35123 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.31□□□□□ -1.24
Usp4P35123 Gm22817-201ENSMUST00000157448 356 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Gm23077-201ENSMUST00000157854 116 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Gm3008-201ENSMUST00000160566 571 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Gm29663-201ENSMUST00000186962 853 ntBASIC7.31□□□□□ -1.24
Usp4P35123 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp4P35123 Gm29664-201ENSMUST00000191125 463 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Gm3841-201ENSMUST00000191399 451 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Gm44395-201ENSMUST00000197056 153 ntBASIC7.31□□□□□ -1.24
Usp4P35123 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.31□□□□□ -1.24
Usp4P35123 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.31□□□□□ -1.24
Usp4P35123 Gm19764-201ENSMUST00000203630 649 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms