Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm25057-201ENSMUST00000157366 88 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm25721-201ENSMUST00000157496 171 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm7420-201ENSMUST00000162836 842 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm12424-201ENSMUST00000179673 447 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm27401-201ENSMUST00000184052 173 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm27458-201ENSMUST00000185108 121 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC5.32□□□□□ -1.56
Sdc1P18828 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.32□□□□□ -1.56
Sdc1P18828 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC5.32□□□□□ -1.56
Sdc1P18828 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc1P18828 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm6909-201ENSMUST00000209825 989 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Olfr809-203ENSMUST00000218237 1100 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 AC152946.3-201ENSMUST00000219424 280 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 CT030182.4-201ENSMUST00000223647 645 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 AC163684.1-201ENSMUST00000223766 927 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 AC154687.1-201ENSMUST00000224875 677 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm9788-201ENSMUST00000057038 906 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm10805-201ENSMUST00000099710 399 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc1P18828 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc1P18828 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sdc1P18828 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Sdc1P18828 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm26469-201ENSMUST00000116765 121 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Gm13690-201ENSMUST00000118989 285 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Gm12229-201ENSMUST00000120487 468 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC5.31□□□□□ -1.56
Sdc1P18828 Defa-ps3-201ENSMUST00000142705 282 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm15275-201ENSMUST00000154752 347 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Sdc1P18828 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm27006-201ENSMUST00000182218 943 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.31□□□□□ -1.56
Sdc1P18828 Mir8095-201ENSMUST00000185103 129 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Ighv10-2-201ENSMUST00000195182 298 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm30619-201ENSMUST00000213962 686 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 AC160338.3-201ENSMUST00000214836 384 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC5.31□□□□□ -1.56
Sdc1P18828 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 AC132384.1-201ENSMUST00000219908 1195 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Gm5668-201ENSMUST00000220897 436 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 AC154461.4-201ENSMUST00000224878 468 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Sdc1P18828 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sdc1P18828 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sdc1P18828 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms