Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccdc180J3QNE4 AC211878.6-201ENSMUST00000221896 358 ntBASIC12.13□□□□□ -0.47
Ccdc180J3QNE4 AC166574.7-201ENSMUST00000228502 704 ntBASIC12.13□□□□□ -0.47
Ccdc180J3QNE4 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc180J3QNE4 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc180J3QNE4 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm25795-201ENSMUST00000104421 132 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm14580-201ENSMUST00000119122 718 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm27507-201ENSMUST00000184199 93 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm5853-201ENSMUST00000197183 632 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm19195-201ENSMUST00000222018 511 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm8256-203ENSMUST00000228692 591 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Zfp850-201ENSMUST00000099111 941 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm38036-201ENSMUST00000194586 3564 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm37274-201ENSMUST00000192167 1682 ntBASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc180J3QNE4 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Gm6446-201ENSMUST00000120604 818 ntBASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Gm4789-201ENSMUST00000121708 1216 ntBASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Gm25387-201ENSMUST00000157813 132 ntBASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Gm24733-201ENSMUST00000158863 253 ntBASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Mir5110-201ENSMUST00000175537 87 ntBASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Gm37786-201ENSMUST00000191714 3225 ntBASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Gm43176-201ENSMUST00000199653 2989 ntBASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Slco6b1-202ENSMUST00000178359 1778 ntBASIC12.11□□□□□ -0.47
Ccdc180J3QNE4 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm23164-201ENSMUST00000175084 111 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm26570-201ENSMUST00000180672 342 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Mir3473g-201ENSMUST00000183494 136 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm36448-201ENSMUST00000199916 438 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm18805-201ENSMUST00000206872 655 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 AC135353.1-201ENSMUST00000215330 630 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm28322-201ENSMUST00000185627 1475 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm2223-201ENSMUST00000112099 1350 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm42462-201ENSMUST00000196543 1363 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm14925-201ENSMUST00000120611 438 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm38097-201ENSMUST00000192936 439 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 n-TStga1-201ENSMUST00000199903 109 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm18112-201ENSMUST00000219862 1195 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 A1cf-203ENSMUST00000224400 1204 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Mir484-201ENSMUST00000093566 67 ntBASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc180J3QNE4 Gm43876-201ENSMUST00000203831 3229 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms