Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm13207-201ENSMUST00000119862 773 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm11498-201ENSMUST00000120660 949 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm37380-201ENSMUST00000193752 397 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm37883-201ENSMUST00000194970 725 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upk3aQ9JKX8 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Rnu11-201ENSMUST00000104135 134 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm14513-201ENSMUST00000117403 123 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm14733-201ENSMUST00000117680 133 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm14300-201ENSMUST00000120800 946 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm12630-201ENSMUST00000121575 784 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm8089-201ENSMUST00000122463 968 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm22604-201ENSMUST00000157604 311 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Mir6367-201ENSMUST00000183385 102 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm2229-201ENSMUST00000193328 710 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm29784-201ENSMUST00000196217 406 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm21731-201ENSMUST00000079524 489 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upk3aQ9JKX8 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms