Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm12104-201ENSMUST00000120359 979 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm25717-201ENSMUST00000158631 353 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm16113-201ENSMUST00000159629 372 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm27178-201ENSMUST00000184962 340 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm28941-201ENSMUST00000185536 1017 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gm5321-201ENSMUST00000072050 447 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.49□□□□□ -1.37
Lima1Q9ERG0 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm26079-201ENSMUST00000104066 133 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm11903-201ENSMUST00000118958 727 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm15129-201ENSMUST00000119673 279 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm5387-201ENSMUST00000119776 857 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm15586-201ENSMUST00000121218 528 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Mir1981-201ENSMUST00000157934 82 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm27617-201ENSMUST00000184321 168 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm5244-202ENSMUST00000189517 743 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm38328-201ENSMUST00000195582 317 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm45122-201ENSMUST00000206376 784 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 AC173482.3-201ENSMUST00000225492 1212 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm23238-201ENSMUST00000083007 164 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm24451-201ENSMUST00000083353 133 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.48□□□□□ -1.37
Lima1Q9ERG0 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lima1Q9ERG0 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm14729-201ENSMUST00000118373 689 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm25574-201ENSMUST00000175245 249 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm27158-201ENSMUST00000183813 238 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms