Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm28910-201ENSMUST00000185921 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28812-201ENSMUST00000185963 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29468-201ENSMUST00000185978 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28335-201ENSMUST00000186204 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28854-201ENSMUST00000186218 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28636-201ENSMUST00000186353 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28452-201ENSMUST00000186623 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29298-201ENSMUST00000186704 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28185-201ENSMUST00000186815 694 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28227-201ENSMUST00000186862 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28796-201ENSMUST00000186905 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29659-201ENSMUST00000187063 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28473-201ENSMUST00000187325 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28558-201ENSMUST00000187373 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28682-201ENSMUST00000187430 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28738-201ENSMUST00000187480 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28949-201ENSMUST00000187805 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28773-201ENSMUST00000187925 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29319-201ENSMUST00000188060 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29422-201ENSMUST00000188062 694 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28734-201ENSMUST00000188104 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28787-201ENSMUST00000188357 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29312-201ENSMUST00000188724 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29451-201ENSMUST00000188862 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29637-201ENSMUST00000188877 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29033-201ENSMUST00000189114 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29614-201ENSMUST00000189263 694 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28751-201ENSMUST00000189287 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29559-201ENSMUST00000189412 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28272-201ENSMUST00000189512 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28483-201ENSMUST00000189519 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28123-201ENSMUST00000189725 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28368-201ENSMUST00000189804 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm7867-201ENSMUST00000189856 546 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29119-201ENSMUST00000189973 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28716-201ENSMUST00000190217 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29239-201ENSMUST00000190304 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28837-201ENSMUST00000190397 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28968-201ENSMUST00000190413 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28531-201ENSMUST00000190529 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28165-201ENSMUST00000190669 694 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29181-201ENSMUST00000191288 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm38229-201ENSMUST00000191931 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm32347-201ENSMUST00000192944 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm38121-201ENSMUST00000193213 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm38035-201ENSMUST00000194427 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm38350-201ENSMUST00000194789 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm37990-201ENSMUST00000195821 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm42708-201ENSMUST00000196332 905 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm9710-201ENSMUST00000198053 499 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29486-201ENSMUST00000088648 372 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm11501-201ENSMUST00000118039 581 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm14466-201ENSMUST00000119028 451 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm6451-201ENSMUST00000121488 717 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm12540-201ENSMUST00000121938 319 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm12175-201ENSMUST00000122081 345 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm15242-201ENSMUST00000122459 283 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms