Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm27617-201ENSMUST00000184321 168 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm27970-201ENSMUST00000184854 407 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm42782-201ENSMUST00000197286 522 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm8182-201ENSMUST00000197863 769 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 CT030175.1-201ENSMUST00000220822 408 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 CT030184.2-201ENSMUST00000223064 263 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm23238-201ENSMUST00000083007 164 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 CT025675.1-201ENSMUST00000228171 1567 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm43496-201ENSMUST00000201682 3001 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Chmp4bQ9D8B3 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm26079-201ENSMUST00000104066 133 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm22781-201ENSMUST00000104083 137 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm12135-201ENSMUST00000119170 466 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm22728-201ENSMUST00000158087 129 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm22533-201ENSMUST00000158821 274 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm24176-201ENSMUST00000158928 121 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Mir6337-201ENSMUST00000184194 105 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm7270-201ENSMUST00000195818 1128 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm6290-201ENSMUST00000207666 1158 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm24621-201ENSMUST00000082679 140 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm46199-201ENSMUST00000220373 1693 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm28112-201ENSMUST00000190898 1875 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.45□□□□□ -1.06
Chmp4bQ9D8B3 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm13141-201ENSMUST00000117417 456 ntBASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm15048-201ENSMUST00000118201 954 ntBASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm4911-201ENSMUST00000119388 945 ntBASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm11498-201ENSMUST00000120660 949 ntBASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm43089-201ENSMUST00000199162 275 ntBASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm20136-201ENSMUST00000207501 891 ntBASIC8.44□□□□□ -1.06
Chmp4bQ9D8B3 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms