Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm25556-201ENSMUST00000158077 144 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm37620-201ENSMUST00000192910 501 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm37322-201ENSMUST00000193409 337 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm2975-201ENSMUST00000209710 820 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm24451-201ENSMUST00000083353 133 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm24519-201ENSMUST00000104507 132 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm2178-201ENSMUST00000104927 357 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm6654-201ENSMUST00000118950 348 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm13754-201ENSMUST00000120486 998 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm6067-201ENSMUST00000121648 491 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm14847-201ENSMUST00000121978 519 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm7613-201ENSMUST00000139070 487 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm2709-201ENSMUST00000142979 350 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm25969-201ENSMUST00000157166 132 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm24545-201ENSMUST00000158651 85 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm7289-201ENSMUST00000168993 734 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm8245-201ENSMUST00000182434 987 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Mir7046-201ENSMUST00000183435 66 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm10416-201ENSMUST00000197379 645 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm44374-201ENSMUST00000199821 140 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm9357-201ENSMUST00000207138 805 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 AC153152.2-201ENSMUST00000223165 959 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Gm44723-201ENSMUST00000207369 4000 ntBASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Smc1aQ9CU62 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm8722-201ENSMUST00000121466 769 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms