Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Mir296-201ENSMUST00000083587 79 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Use1Q9CQ56 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.26□□□□□ -1.41
Use1Q9CQ56 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm13265-201ENSMUST00000118090 421 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm13988-201ENSMUST00000119363 288 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm25770-201ENSMUST00000158566 115 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm22523-201ENSMUST00000158696 100 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm27026-201ENSMUST00000183003 892 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm28006-201ENSMUST00000183841 122 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Mir6241-201ENSMUST00000184225 103 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm20690-202ENSMUST00000195126 355 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm43141-201ENSMUST00000199695 274 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm4605-201ENSMUST00000203148 625 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm6885-201ENSMUST00000217261 372 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm8616-201ENSMUST00000222175 1037 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm5341-201ENSMUST00000058881 489 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Use1Q9CQ56 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.25□□□□□ -1.41
Use1Q9CQ56 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms