Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc9Q8VC31 Gm15583-201ENSMUST00000116191 3510 ntBASIC8.02□□□□□ -1.13
Ccdc9Q8VC31 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.02□□□□□ -1.13
Ccdc9Q8VC31 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm24462-201ENSMUST00000102430 106 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm22660-201ENSMUST00000104193 130 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm22022-201ENSMUST00000104355 127 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Zfp389-201ENSMUST00000118425 675 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm11976-201ENSMUST00000119236 295 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm12599-201ENSMUST00000120534 792 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm23657-201ENSMUST00000122623 294 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm8304-201ENSMUST00000185744 584 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm38022-201ENSMUST00000191762 403 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm40319-201ENSMUST00000199785 481 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm5948-201ENSMUST00000219627 839 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm2840-201ENSMUST00000048361 411 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm37249-201ENSMUST00000195185 2869 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 CT009757.5-201ENSMUST00000221858 3425 ntBASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ccdc9Q8VC31 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 CT009733.2-202ENSMUST00000224171 4748 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 AC165260.6-206ENSMUST00000223884 3698 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm13282-201ENSMUST00000121577 545 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm9167-201ENSMUST00000182469 962 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Mir6239-201ENSMUST00000183564 105 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm18255-201ENSMUST00000211316 765 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 AC160635.1-201ENSMUST00000216731 474 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 AC079644.3-201ENSMUST00000222452 357 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm18247-201ENSMUST00000222937 601 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 AC129537.1-202ENSMUST00000226619 430 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 AC121542.2-201ENSMUST00000227529 400 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm5316-201ENSMUST00000050391 270 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 n-R5s89-201ENSMUST00000083532 104 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm37060-201ENSMUST00000194997 2397 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Gm43023-201ENSMUST00000197583 2106 ntBASIC8□□□□□ -1.13
Ccdc9Q8VC31 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ccdc9Q8VC31 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms