Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopaQ8CIE6 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CopaQ8CIE6 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CopaQ8CIE6 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.01□□□□□ -1.29
CopaQ8CIE6 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopaQ8CIE6 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.01□□□□□ -1.29
CopaQ8CIE6 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CopaQ8CIE6 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopaQ8CIE6 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.01□□□□□ -1.29
CopaQ8CIE6 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.01□□□□□ -1.29
CopaQ8CIE6 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.01□□□□□ -1.29
CopaQ8CIE6 Gm37332-201ENSMUST00000195853 2844 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm45174-201ENSMUST00000208884 3065 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm15229-201ENSMUST00000146636 1398 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm12985-201ENSMUST00000118376 183 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm4911-201ENSMUST00000119388 945 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm14489-201ENSMUST00000120868 901 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm14353-201ENSMUST00000122200 869 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm26211-201ENSMUST00000158578 129 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm8357-201ENSMUST00000181115 1011 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
CopaQ8CIE6 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm37328-201ENSMUST00000193191 640 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm8924-201ENSMUST00000197405 1132 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm21040-201ENSMUST00000199493 1132 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm42640-201ENSMUST00000199792 1195 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 AC099934.1-201ENSMUST00000200493 79 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm20177-201ENSMUST00000203705 334 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm44279-201ENSMUST00000205154 472 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm44607-201ENSMUST00000205611 1090 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7□□□□□ -1.29
CopaQ8CIE6 AC155709.1-201ENSMUST00000218794 162 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7□□□□□ -1.29
CopaQ8CIE6 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 AC156574.1-201ENSMUST00000227084 452 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 AC154484.2-201ENSMUST00000228359 818 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm24924-201ENSMUST00000084007 164 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
CopaQ8CIE6 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Gm6327-201ENSMUST00000171185 1335 ntBASIC7□□□□□ -1.29
CopaQ8CIE6 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
CopaQ8CIE6 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.99□□□□□ -1.29
CopaQ8CIE6 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.99□□□□□ -1.29
CopaQ8CIE6 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.99□□□□□ -1.29
CopaQ8CIE6 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gm22774-201ENSMUST00000102084 109 ntBASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gm15616-201ENSMUST00000118662 375 ntBASIC6.99□□□□□ -1.29
CopaQ8CIE6 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.99□□□□□ -1.29
CopaQ8CIE6 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms