Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc28bQ8CEG5 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28bQ8CEG5 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm25725-201ENSMUST00000104528 130 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm13414-201ENSMUST00000117516 727 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm15778-201ENSMUST00000118469 608 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm12817-201ENSMUST00000119622 610 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm11688-201ENSMUST00000122145 308 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm25455-201ENSMUST00000157946 325 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm3585-201ENSMUST00000173438 875 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm23139-201ENSMUST00000179454 132 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm26528-201ENSMUST00000181965 283 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm29470-201ENSMUST00000188007 696 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm28341-201ENSMUST00000190883 472 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm8860-201ENSMUST00000193160 445 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28bQ8CEG5 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm25760-201ENSMUST00000103989 132 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm26079-201ENSMUST00000104066 133 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm24373-201ENSMUST00000104393 132 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm25498-201ENSMUST00000104424 129 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm8421-201ENSMUST00000119439 305 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm8916-201ENSMUST00000119732 949 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm11581-201ENSMUST00000122024 763 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 BC064078-201ENSMUST00000122939 570 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm23822-201ENSMUST00000158739 128 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm8893-201ENSMUST00000172146 1242 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm8245-201ENSMUST00000182434 987 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Mir7084-201ENSMUST00000183876 70 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm28142-201ENSMUST00000186899 698 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm19891-201ENSMUST00000189771 303 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm43084-201ENSMUST00000200696 947 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm45122-201ENSMUST00000206376 784 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms