Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Pramel-201ENSMUST00000118979 1383 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Mir678-201ENSMUST00000102114 84 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm8722-201ENSMUST00000121466 769 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm21614-201ENSMUST00000183260 1005 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm44342-201ENSMUST00000196874 129 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm5711-201ENSMUST00000197896 421 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm44383-201ENSMUST00000198940 129 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm44374-201ENSMUST00000199821 140 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm44565-201ENSMUST00000208194 269 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Mir296-201ENSMUST00000083587 79 ntBASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Nup88Q8CEC0 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm25724-201ENSMUST00000104531 117 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm14116-201ENSMUST00000117733 805 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm6654-201ENSMUST00000118950 348 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm11370-201ENSMUST00000120583 260 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm15242-201ENSMUST00000122459 283 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm26353-201ENSMUST00000158224 255 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm25025-201ENSMUST00000175018 111 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28739-201ENSMUST00000185415 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28219-201ENSMUST00000185452 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28542-201ENSMUST00000185545 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28303-201ENSMUST00000185642 747 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm29244-201ENSMUST00000185825 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm29437-201ENSMUST00000185865 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm29412-201ENSMUST00000185869 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28910-201ENSMUST00000185921 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28812-201ENSMUST00000185963 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm29468-201ENSMUST00000185978 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28335-201ENSMUST00000186204 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28854-201ENSMUST00000186218 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28636-201ENSMUST00000186353 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28452-201ENSMUST00000186623 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm29298-201ENSMUST00000186704 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28185-201ENSMUST00000186815 694 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28227-201ENSMUST00000186862 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28796-201ENSMUST00000186905 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm29659-201ENSMUST00000187063 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28473-201ENSMUST00000187325 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28558-201ENSMUST00000187373 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28682-201ENSMUST00000187430 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28738-201ENSMUST00000187480 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm29464-201ENSMUST00000187692 513 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28949-201ENSMUST00000187805 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm28773-201ENSMUST00000187925 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm29319-201ENSMUST00000188060 696 ntBASIC7.86□□□□□ -1.15
Nup88Q8CEC0 Gm29422-201ENSMUST00000188062 694 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms