Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm11796-201ENSMUST00000120208 972 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm11498-201ENSMUST00000120660 949 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm11553-201ENSMUST00000120682 240 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm26046-201ENSMUST00000157312 166 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm26321-201ENSMUST00000157740 242 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm27970-201ENSMUST00000184854 407 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm28846-201ENSMUST00000189161 368 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm38384-201ENSMUST00000195413 1122 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm3549-201ENSMUST00000203873 794 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm17997-201ENSMUST00000211801 840 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 AC134913.1-201ENSMUST00000224563 504 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 AC122937.2-201ENSMUST00000228258 1051 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 AC136019.1-201ENSMUST00000226503 1412 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 AC154806.2-201ENSMUST00000227212 2385 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm13732-201ENSMUST00000117753 535 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm11501-201ENSMUST00000118039 581 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm5166-201ENSMUST00000121332 573 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm4997-201ENSMUST00000154056 360 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm26238-201ENSMUST00000175538 117 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm29160-201ENSMUST00000190094 699 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm37631-201ENSMUST00000192275 364 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm7463-201ENSMUST00000201541 547 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 AC132881.2-201ENSMUST00000225474 709 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.35□□□□□ -1.23
Trim9Q8C7M3 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm42479-201ENSMUST00000198654 1356 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm13207-201ENSMUST00000119862 773 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm22764-201ENSMUST00000158370 92 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms