Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm16139-201ENSMUST00000160015 420 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm27960-201ENSMUST00000183445 184 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm45026-201ENSMUST00000205292 833 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Dgkh-206ENSMUST00000228362 3308 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm15332-201ENSMUST00000118386 357 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm14805-201ENSMUST00000120172 340 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm7931-201ENSMUST00000121537 271 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm26162-201ENSMUST00000157793 132 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm22724-201ENSMUST00000158091 127 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm37463-201ENSMUST00000193819 796 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm5154-201ENSMUST00000203971 399 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm36501-201ENSMUST00000221857 745 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm15732-201ENSMUST00000079794 480 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm26130-201ENSMUST00000083171 138 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm22372-201ENSMUST00000104589 136 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm15568-201ENSMUST00000118589 1213 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm27507-201ENSMUST00000184199 93 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm18805-201ENSMUST00000206872 655 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm45782-201ENSMUST00000212670 366 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm6776-201ENSMUST00000057752 900 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Mir298-201ENSMUST00000083476 82 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Prkaa1-202ENSMUST00000228218 4618 ntBASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a6Q8C6K9 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms