Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Olfr197-201ENSMUST00000080031 926 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm11322-201ENSMUST00000118095 435 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm27019-201ENSMUST00000183056 404 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm27659-201ENSMUST00000183472 98 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm28266-201ENSMUST00000191410 439 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm42424-201ENSMUST00000198319 376 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm18484-201ENSMUST00000204389 991 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm9249-201ENSMUST00000221420 578 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm18388-201ENSMUST00000222339 557 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm10123-201ENSMUST00000075723 490 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm24522-201ENSMUST00000083964 108 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Ephx2-202ENSMUST00000224698 1985 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm37010-201ENSMUST00000194539 1704 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Gm5402-201ENSMUST00000119588 1618 ntBASIC8.51□□□□□ -1.05
Trim47Q8C0E3 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim47Q8C0E3 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm22152-201ENSMUST00000116966 125 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm11383-201ENSMUST00000121346 807 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm14122-201ENSMUST00000122076 973 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm14380-201ENSMUST00000122298 431 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm26046-201ENSMUST00000157312 166 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm22948-201ENSMUST00000158561 243 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm16134-201ENSMUST00000161714 336 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC8.5□□□□□ -1.05
Trim47Q8C0E3 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms