Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm26419-201ENSMUST00000104272 133 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm26416-201ENSMUST00000104280 134 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm23891-201ENSMUST00000158114 138 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm26211-201ENSMUST00000158578 129 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm19185-201ENSMUST00000196365 643 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm24451-201ENSMUST00000083353 133 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm14886-201ENSMUST00000117208 2629 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc40Q8BI79 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
Ccdc40Q8BI79 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm44901-201ENSMUST00000208157 3977 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm24473-201ENSMUST00000104483 131 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm25724-201ENSMUST00000104531 117 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm14729-201ENSMUST00000118373 689 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm14485-201ENSMUST00000119489 493 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm14796-201ENSMUST00000121216 959 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Mir1929-201ENSMUST00000158635 93 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm7418-201ENSMUST00000162120 801 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm3760-201ENSMUST00000167475 804 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm9167-201ENSMUST00000182469 962 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Mir6241-201ENSMUST00000184225 103 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm6077-201ENSMUST00000196008 499 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm9604-201ENSMUST00000211175 433 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms