Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm37376-201ENSMUST00000192176 453 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm42652-201ENSMUST00000199073 614 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm4994-201ENSMUST00000118379 2187 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm14550-201ENSMUST00000117918 407 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm23894-201ENSMUST00000158107 313 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm23071-201ENSMUST00000158242 115 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Ighv5-3-201ENSMUST00000195336 322 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm37358-201ENSMUST00000195492 479 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 AC163743.1-201ENSMUST00000224309 270 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 AC154626.1-201ENSMUST00000226070 311 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 AC159979.1-201ENSMUST00000227927 342 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm15016-201ENSMUST00000117300 720 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm15715-201ENSMUST00000118032 283 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm28934-201ENSMUST00000186491 346 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm8506-201ENSMUST00000186661 829 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Trav3n-2-201ENSMUST00000197693 334 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Trav3d-2-201ENSMUST00000199874 334 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm4374-201ENSMUST00000204929 424 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm7570-201ENSMUST00000215246 698 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm16335-201ENSMUST00000077495 309 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 AC112142.1-203ENSMUST00000228670 2472 ntBASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC8.19□□□□□ -1.1
Shank3Q4ACU6 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 AC151904.1-201ENSMUST00000219945 1498 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm13930-201ENSMUST00000118569 368 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm25065-201ENSMUST00000177914 132 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms