Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Gm28047Q3US59 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.13□□□□□ -1.11
Gm28047Q3US59 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm23852-201ENSMUST00000158376 77 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm16026-205ENSMUST00000162923 641 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm17061-201ENSMUST00000163167 499 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Mir3072-201ENSMUST00000175610 83 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm28413-201ENSMUST00000189369 291 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm43232-201ENSMUST00000201346 364 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm18861-201ENSMUST00000202509 1186 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 AC157650.2-201ENSMUST00000224666 328 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.12□□□□□ -1.11
Gm28047Q3US59 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Gm28047Q3US59 Gm44704-201ENSMUST00000208963 1990 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm14677-201ENSMUST00000117866 486 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm15778-201ENSMUST00000118469 608 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm25505-201ENSMUST00000157220 246 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm22948-201ENSMUST00000158561 243 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm27401-201ENSMUST00000184052 173 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Mir6357-201ENSMUST00000184246 104 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm6610-201ENSMUST00000186324 358 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm28142-201ENSMUST00000186899 698 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm29354-201ENSMUST00000187613 696 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm37585-201ENSMUST00000195440 280 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 AC167202.1-201ENSMUST00000219027 331 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm18955-201ENSMUST00000223173 649 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 CT025523.1-201ENSMUST00000228318 694 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Olfr683-201ENSMUST00000061284 960 ntBASIC8.11□□□□□ -1.11
Gm28047Q3US59 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm28047Q3US59 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms