Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm12573-201ENSMUST00000118158 286 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm29156-201ENSMUST00000187764 499 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm21048-201ENSMUST00000202470 1166 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm44213-201ENSMUST00000204977 703 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm17918-201ENSMUST00000205315 574 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm9367-201ENSMUST00000205703 546 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm24036-201ENSMUST00000082868 156 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.12□□□□□ -1.27
Upf3bQ3ULL6 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm14870-201ENSMUST00000118414 156 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm5601-201ENSMUST00000118909 972 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm23756-201ENSMUST00000157582 114 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm29197-201ENSMUST00000185922 702 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm28620-201ENSMUST00000190463 439 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upf3bQ3ULL6 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms