Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm14755-201ENSMUST00000118037 384 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm22523-201ENSMUST00000158696 100 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm25989-201ENSMUST00000158761 133 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm16113-201ENSMUST00000159629 372 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm16102-201ENSMUST00000160955 420 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm20615-201ENSMUST00000177503 705 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Mir6241-201ENSMUST00000184225 103 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm42782-201ENSMUST00000197286 522 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm44856-201ENSMUST00000206639 304 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm45196-201ENSMUST00000206751 825 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm4585-201ENSMUST00000207218 452 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm5446-201ENSMUST00000091762 784 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trafd1Q3UDK1 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm26419-201ENSMUST00000104272 133 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm11833-201ENSMUST00000118393 853 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm20691-201ENSMUST00000176889 333 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Mir8105-201ENSMUST00000184718 89 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm3678-201ENSMUST00000218888 492 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Gm9985-201ENSMUST00000044101 510 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Mir296-201ENSMUST00000083587 79 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trafd1Q3UDK1 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.6□□□□□ -1.35
Trafd1Q3UDK1 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms