Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm45201-201ENSMUST00000207187 2679 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm37541-201ENSMUST00000192464 2315 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm23437-201ENSMUST00000104036 127 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm24473-201ENSMUST00000104483 131 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm11882-201ENSMUST00000121463 506 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm16284-201ENSMUST00000140995 400 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm23018-201ENSMUST00000177928 109 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm7412-201ENSMUST00000191692 605 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm19185-201ENSMUST00000196365 643 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm43157-201ENSMUST00000198223 412 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm9652-201ENSMUST00000209345 163 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm10388-201ENSMUST00000205001 2936 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 AU020206-202ENSMUST00000206358 3009 ntBASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim43aQ3TL54 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm6558-201ENSMUST00000191934 1973 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm22774-201ENSMUST00000102084 109 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm13469-201ENSMUST00000118231 350 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm13744-201ENSMUST00000118953 850 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm26486-201ENSMUST00000158021 110 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm8715-201ENSMUST00000162728 531 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm27001-201ENSMUST00000182252 936 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm27026-201ENSMUST00000183003 892 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm29214-201ENSMUST00000190216 570 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm43689-201ENSMUST00000195951 427 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.04□□□□□ -1.28
Trim43aQ3TL54 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm37429-201ENSMUST00000193807 1799 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm14904-201ENSMUST00000117067 335 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm12447-201ENSMUST00000119110 470 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm13444-201ENSMUST00000119445 522 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms