Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm14279-201ENSMUST00000117142 332 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm10243-201ENSMUST00000117571 333 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm15158-201ENSMUST00000120577 570 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm14531-201ENSMUST00000120845 285 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm2976-201ENSMUST00000160362 513 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm7244-201ENSMUST00000164658 455 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir669a-7-201ENSMUST00000180364 87 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm26595-201ENSMUST00000181585 484 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir6357-201ENSMUST00000184246 104 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm28934-201ENSMUST00000186491 346 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm18875-201ENSMUST00000188563 882 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm37614-201ENSMUST00000195645 210 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir669a-6-201ENSMUST00000196127 87 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir669a-12-201ENSMUST00000197274 87 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir669a-5-201ENSMUST00000197439 87 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir669a-10-201ENSMUST00000197745 87 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir669a-11-201ENSMUST00000197952 87 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir669a-4-201ENSMUST00000198665 87 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir669a-9-201ENSMUST00000200087 87 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Mir669a-8-201ENSMUST00000200268 87 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm44137-201ENSMUST00000203670 367 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm7443-201ENSMUST00000206355 378 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm10247-201ENSMUST00000090395 333 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Usp39Q3TIX9 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm15933-201ENSMUST00000117215 616 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm15778-201ENSMUST00000118469 608 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm12944-201ENSMUST00000119262 463 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm12375-201ENSMUST00000119331 921 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm12757-201ENSMUST00000119465 800 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm11689-201ENSMUST00000120766 302 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm25505-201ENSMUST00000157220 246 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm3715-201ENSMUST00000172308 617 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm7481-201ENSMUST00000182020 995 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm27026-201ENSMUST00000183003 892 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm29357-201ENSMUST00000186877 698 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm8101-201ENSMUST00000192796 478 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm42580-201ENSMUST00000197223 753 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm43396-201ENSMUST00000197506 706 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm45636-201ENSMUST00000210497 1064 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms