Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm11853-201ENSMUST00000119687 1384 ntBASIC5.5□□□□□ -1.53
Cdx4Q07424 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdx4Q07424 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx4Q07424 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx4Q07424 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC5.5□□□□□ -1.53
Cdx4Q07424 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.5□□□□□ -1.53
Cdx4Q07424 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx4Q07424 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx4Q07424 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdx4Q07424 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx4Q07424 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Cdx4Q07424 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx4Q07424 Gm26575-201ENSMUST00000181714 2232 ntBASIC5.5□□□□□ -1.53
Cdx4Q07424 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Cdx4Q07424 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx4Q07424 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 AC153143.1-201ENSMUST00000222966 1340 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Klf5-202ENSMUST00000226784 2852 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm14279-201ENSMUST00000117142 332 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm10243-201ENSMUST00000117571 333 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm11393-201ENSMUST00000118019 288 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm15842-201ENSMUST00000120513 618 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm11188-201ENSMUST00000122382 388 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm22795-201ENSMUST00000157233 118 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm7481-201ENSMUST00000182020 995 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm27861-201ENSMUST00000183920 214 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm2429-201ENSMUST00000194635 586 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm23011-202ENSMUST00000197855 275 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm43629-201ENSMUST00000201782 704 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC5.49□□□□□ -1.53
Cdx4Q07424 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm45478-201ENSMUST00000209472 211 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm18562-201ENSMUST00000209949 915 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm45432-201ENSMUST00000210391 416 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm45782-201ENSMUST00000212670 366 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 AC134869.2-201ENSMUST00000225788 421 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm10247-201ENSMUST00000090395 333 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm20768-201ENSMUST00000199527 2338 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.49□□□□□ -1.53
Cdx4Q07424 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx4Q07424 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx4Q07424 Gm45793-201ENSMUST00000207900 1342 ntBASIC5.48□□□□□ -1.53
Cdx4Q07424 Gm13106-201ENSMUST00000119045 1443 ntBASIC5.48□□□□□ -1.53
Cdx4Q07424 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx4Q07424 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdx4Q07424 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC5.48□□□□□ -1.53
Cdx4Q07424 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdx4Q07424 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Cdx4Q07424 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms