Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mir6241-201ENSMUST00000184225 103 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm43884-201ENSMUST00000204251 559 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 AC122360.1-201ENSMUST00000217737 624 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 AC154724.1-201ENSMUST00000225782 821 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 AC139845.2-201ENSMUST00000227504 436 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm5528-201ENSMUST00000076314 480 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Pramel-201ENSMUST00000118979 1383 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 BC085271-201ENSMUST00000191852 1487 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm22707-201ENSMUST00000103834 110 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm16073-201ENSMUST00000116032 517 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm25773-201ENSMUST00000116718 127 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm16007-201ENSMUST00000117837 286 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm14000-201ENSMUST00000118670 233 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm15484-201ENSMUST00000118871 828 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm15443-201ENSMUST00000118947 820 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm13545-201ENSMUST00000119044 482 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm14945-201ENSMUST00000119556 1118 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm12140-201ENSMUST00000121214 544 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm14587-201ENSMUST00000121714 658 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.29□□□□□ -1.4
Col8a1Q00780 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm22518-201ENSMUST00000158267 68 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm27360-201ENSMUST00000183487 80 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm29474-201ENSMUST00000187688 379 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm28396-201ENSMUST00000190309 379 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm37578-201ENSMUST00000192256 1177 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm37956-201ENSMUST00000195208 2010 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm10416-201ENSMUST00000197379 645 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm44538-201ENSMUST00000205615 348 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm45485-201ENSMUST00000211229 357 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm18914-201ENSMUST00000214625 616 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.29□□□□□ -1.4
Col8a1Q00780 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col8a1Q00780 Gm7557-201ENSMUST00000221935 865 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 AC154552.5-201ENSMUST00000222352 207 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Diaph3-206ENSMUST00000226745 713 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 AC098742.1-201ENSMUST00000227945 373 ntBASIC6.29□□□□□ -1.4
Col8a1Q00780 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms