Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 AC112680.2-201ENSMUST00000213119 595 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm10205-201ENSMUST00000087431 234 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm43410-201ENSMUST00000197510 2234 ntBASIC8.64□□□□□ -1.03
Smarcc1P97496 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.64□□□□□ -1.03
Smarcc1P97496 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.63□□□□□ -1.03
Smarcc1P97496 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm26143-201ENSMUST00000104480 108 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm26474-201ENSMUST00000116762 122 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm14733-201ENSMUST00000117680 133 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm11256-201ENSMUST00000118109 829 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm14202-201ENSMUST00000120121 311 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm15300-201ENSMUST00000122324 279 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm25550-201ENSMUST00000158079 128 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Scgb2b33-201ENSMUST00000187413 334 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm43689-201ENSMUST00000195951 427 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm44412-201ENSMUST00000203018 294 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm19269-201ENSMUST00000211401 804 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm45782-201ENSMUST00000212670 366 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm8058-201ENSMUST00000217247 587 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 AC132954.2-201ENSMUST00000222400 403 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm21731-201ENSMUST00000079524 489 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 Olfr519-201ENSMUST00000084752 960 ntBASIC8.63□□□□□ -1.03
Smarcc1P97496 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Smarcc1P97496 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.62□□□□□ -1.03
Smarcc1P97496 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.62□□□□□ -1.03
Smarcc1P97496 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Smarcc1P97496 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.62□□□□□ -1.03
Smarcc1P97496 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Smarcc1P97496 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Smarcc1P97496 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Smarcc1P97496 Gm8250-201ENSMUST00000117398 774 ntBASIC8.62□□□□□ -1.03
Smarcc1P97496 Gm13983-201ENSMUST00000118018 865 ntBASIC8.62□□□□□ -1.03
Smarcc1P97496 Gm13835-201ENSMUST00000118459 685 ntBASIC8.62□□□□□ -1.03
Smarcc1P97496 Gm15719-201ENSMUST00000120619 635 ntBASIC8.62□□□□□ -1.03
Smarcc1P97496 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Smarcc1P97496 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.62□□□□□ -1.03
Smarcc1P97496 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Smarcc1P97496 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms