Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm15349-201ENSMUST00000121154 204 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Gm4886-201ENSMUST00000121874 1176 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC5.97□□□□□ -1.45
H3f3aP84244 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.97□□□□□ -1.45
H3f3aP84244 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC5.97□□□□□ -1.45
H3f3aP84244 Gm24781-201ENSMUST00000157636 117 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H3f3aP84244 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3f3aP84244 Gm27152-201ENSMUST00000183828 99 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Gm28846-201ENSMUST00000189161 368 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC5.97□□□□□ -1.45
H3f3aP84244 Gm37620-201ENSMUST00000192910 501 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Gm18112-201ENSMUST00000219862 1195 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC5.97□□□□□ -1.45
H3f3aP84244 AC132954.2-201ENSMUST00000222400 403 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Gm2754-201ENSMUST00000223383 589 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H3f3aP84244 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3f3aP84244 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
H3f3aP84244 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
H3f3aP84244 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 AC138765.2-202ENSMUST00000228418 3435 ntBASIC5.97□□□□□ -1.45
H3f3aP84244 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3f3aP84244 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
H3f3aP84244 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H3f3aP84244 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.97□□□□□ -1.45
H3f3aP84244 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3f3aP84244 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
H3f3aP84244 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
H3f3aP84244 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
H3f3aP84244 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
H3f3aP84244 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H3f3aP84244 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
H3f3aP84244 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm14158-201ENSMUST00000118409 308 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm13222-201ENSMUST00000119638 138 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm11796-201ENSMUST00000120208 972 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm7113-201ENSMUST00000120477 958 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm5809-201ENSMUST00000121854 529 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm7289-201ENSMUST00000168993 734 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm5456-201ENSMUST00000170706 844 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm17045-201ENSMUST00000178600 844 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm8609-201ENSMUST00000182967 998 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Mir7058-201ENSMUST00000184637 75 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm29156-201ENSMUST00000187764 499 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm4860-201ENSMUST00000200368 454 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm43377-201ENSMUST00000201640 455 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm44227-201ENSMUST00000203576 241 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm18012-201ENSMUST00000204558 773 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm44896-201ENSMUST00000206190 772 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm45394-201ENSMUST00000209240 1175 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Gm18781-201ENSMUST00000211252 924 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 AL837512.1-201ENSMUST00000223914 1073 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H3f3aP84244 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H3f3aP84244 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm6419-201ENSMUST00000097166 429 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm20121-201ENSMUST00000198547 1594 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
H3f3aP84244 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm5454-201ENSMUST00000052030 1453 ntBASIC5.96□□□□□ -1.46
H3f3aP84244 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC5.96□□□□□ -1.46
H3f3aP84244 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
H3f3aP84244 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms