Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.32□□□□□ -1.24
CiitaP79621 Gm27152-201ENSMUST00000183828 99 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm28196-201ENSMUST00000187719 640 ntBASIC7.32□□□□□ -1.24
CiitaP79621 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.32□□□□□ -1.24
CiitaP79621 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC7.32□□□□□ -1.24
CiitaP79621 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm6991-201ENSMUST00000218475 1178 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
CiitaP79621 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CiitaP79621 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CiitaP79621 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.32□□□□□ -1.24
CiitaP79621 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CiitaP79621 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.31□□□□□ -1.24
CiitaP79621 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.31□□□□□ -1.24
CiitaP79621 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
CiitaP79621 Gm23768-201ENSMUST00000104440 131 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CiitaP79621 Gm15216-201ENSMUST00000118058 277 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Gm13265-201ENSMUST00000118090 421 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Gm12713-201ENSMUST00000118404 764 ntBASIC7.31□□□□□ -1.24
CiitaP79621 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Gm24781-201ENSMUST00000157636 117 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Gm16102-201ENSMUST00000160955 420 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Gm17046-201ENSMUST00000168078 850 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Gm24812-201ENSMUST00000175315 284 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Gm44833-201ENSMUST00000208368 331 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.31□□□□□ -1.24
CiitaP79621 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Thoc7-209ENSMUST00000225325 765 ntBASIC7.31□□□□□ -1.24
CiitaP79621 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.31□□□□□ -1.24
CiitaP79621 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.31□□□□□ -1.24
CiitaP79621 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CiitaP79621 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.31□□□□□ -1.24
CiitaP79621 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CiitaP79621 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.31□□□□□ -1.24
CiitaP79621 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CiitaP79621 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.3□□□□□ -1.24
CiitaP79621 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm26340-201ENSMUST00000102365 99 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms