Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm3496-201ENSMUST00000188283 745 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm29165-201ENSMUST00000190655 664 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm29211-201ENSMUST00000191470 664 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm37506-201ENSMUST00000192008 143 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm37098-201ENSMUST00000192290 244 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm37433-201ENSMUST00000192695 678 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm37441-201ENSMUST00000194430 678 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm8861-201ENSMUST00000196346 832 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm43212-201ENSMUST00000198208 394 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm8556-201ENSMUST00000210437 664 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.63□□□□□ -1.35
Sf3b6P59708 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC6.63□□□□□ -1.35
Sf3b6P59708 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC6.63□□□□□ -1.35
Sf3b6P59708 AL645704.1-201ENSMUST00000221642 604 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 AC154747.1-201ENSMUST00000225265 239 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sf3b6P59708 AC154738.3-201ENSMUST00000227953 409 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.63□□□□□ -1.35
Sf3b6P59708 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sf3b6P59708 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm22271-201ENSMUST00000104035 128 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm16221-201ENSMUST00000117331 393 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm14885-201ENSMUST00000117969 496 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm12817-201ENSMUST00000119622 610 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC6.62□□□□□ -1.35
Sf3b6P59708 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm11933-201ENSMUST00000121550 375 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm23046-201ENSMUST00000158369 284 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Mir6922-201ENSMUST00000185099 66 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm37727-201ENSMUST00000191637 819 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC6.62□□□□□ -1.35
Sf3b6P59708 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC6.62□□□□□ -1.35
Sf3b6P59708 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms