Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Nphp4P59240 Gm44417-201ENSMUST00000203298 3359 ntBASIC9□□□□□ -0.97
Nphp4P59240 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC9□□□□□ -0.97
Nphp4P59240 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Nphp4P59240 AC154806.2-201ENSMUST00000227212 2385 ntBASIC9□□□□□ -0.97
Nphp4P59240 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC9□□□□□ -0.97
Nphp4P59240 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC9□□□□□ -0.97
Nphp4P59240 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC9□□□□□ -0.97
Nphp4P59240 Dennd6a-204ENSMUST00000224248 2775 ntBASIC8.99□□□□□ -0.97
Nphp4P59240 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm15096-201ENSMUST00000121918 878 ntBASIC8.99□□□□□ -0.97
Nphp4P59240 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm29509-201ENSMUST00000185716 321 ntBASIC8.99□□□□□ -0.97
Nphp4P59240 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC8.99□□□□□ -0.97
Nphp4P59240 AC115793.1-201ENSMUST00000216605 215 ntBASIC8.99□□□□□ -0.97
Nphp4P59240 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.99□□□□□ -0.97
Nphp4P59240 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Nphp4P59240 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Nphp4P59240 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Nphp4P59240 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Nphp4P59240 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Nphp4P59240 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Nphp4P59240 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nphp4P59240 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nphp4P59240 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Nphp4P59240 Gm29385-201ENSMUST00000186831 363 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.98□□□□□ -0.97
Nphp4P59240 Gm44213-201ENSMUST00000204977 703 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Gm2926-201ENSMUST00000205625 239 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Gm2225-201ENSMUST00000209570 377 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nphp4P59240 AC126685.1-201ENSMUST00000221001 121 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Gm9321-201ENSMUST00000221179 778 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC8.98□□□□□ -0.97
Nphp4P59240 AC154481.1-201ENSMUST00000223532 331 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 AC154250.1-201ENSMUST00000224775 489 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 CT009556.1-201ENSMUST00000227282 449 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nphp4P59240 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nphp4P59240 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nphp4P59240 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Nphp4P59240 Gm37725-201ENSMUST00000193965 2125 ntBASIC8.98□□□□□ -0.97
Nphp4P59240 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nphp4P59240 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nphp4P59240 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nphp4P59240 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Nphp4P59240 Gm11821-201ENSMUST00000117335 979 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Gm13835-201ENSMUST00000118459 685 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 M6pr-ps-201ENSMUST00000120481 830 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Gm12307-201ENSMUST00000120581 590 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Gm27005-201ENSMUST00000182783 921 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Gm27602-201ENSMUST00000183861 111 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC8.97□□□□□ -0.97
Nphp4P59240 Gm43719-201ENSMUST00000200088 2199 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC8.97□□□□□ -0.97
Nphp4P59240 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC8.97□□□□□ -0.97
Nphp4P59240 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC8.97□□□□□ -0.97
Nphp4P59240 AC156559.2-201ENSMUST00000224403 384 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 CT025667.1-201ENSMUST00000225872 382 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Nphp4P59240 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Nphp4P59240 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms