Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.04
Msh6P54276 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Msh6P54276 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Msh6P54276 Gm9005-201ENSMUST00000119908 607 ntBASIC8.52□□□□□ -1.05
Msh6P54276 Gm15300-201ENSMUST00000122324 279 ntBASIC8.52□□□□□ -1.05
Msh6P54276 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Msh6P54276 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC8.52□□□□□ -1.05
Msh6P54276 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Msh6P54276 Gm27030-201ENSMUST00000182551 464 ntBASIC8.52□□□□□ -1.05
Msh6P54276 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Msh6P54276 AC140930.1-201ENSMUST00000221889 389 ntBASIC8.52□□□□□ -1.05
Msh6P54276 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC8.52□□□□□ -1.05
Msh6P54276 AC125117.2-201ENSMUST00000228344 1140 ntBASIC8.52□□□□□ -1.05
Msh6P54276 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Msh6P54276 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Msh6P54276 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
Msh6P54276 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Msh6P54276 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Msh6P54276 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
Msh6P54276 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Msh6P54276 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Msh6P54276 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Msh6P54276 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Msh6P54276 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.52□□□□□ -1.05
Msh6P54276 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Msh6P54276 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Msh6P54276 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Msh6P54276 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.52□□□□□ -1.05
Msh6P54276 Snora35-201ENSMUST00000104579 128 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC8.51□□□□□ -1.05
Msh6P54276 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.51□□□□□ -1.05
Msh6P54276 Gm11256-201ENSMUST00000118109 829 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gm15149-201ENSMUST00000119370 360 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC8.51□□□□□ -1.05
Msh6P54276 Gm23225-201ENSMUST00000158121 114 ntBASIC8.51□□□□□ -1.05
Msh6P54276 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Gm3076-201ENSMUST00000161613 451 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gm27512-201ENSMUST00000175328 126 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gm25244-201ENSMUST00000178089 132 ntBASIC8.51□□□□□ -1.05
Msh6P54276 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
Msh6P54276 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.51□□□□□ -1.05
Msh6P54276 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Gm27210-201ENSMUST00000184263 402 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gm18700-201ENSMUST00000185791 553 ntBASIC8.51□□□□□ -1.05
Msh6P54276 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gm38122-201ENSMUST00000192679 885 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC8.51□□□□□ -1.05
Msh6P54276 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC8.51□□□□□ -1.05
Msh6P54276 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gm45734-201ENSMUST00000211916 411 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Gm33178-201ENSMUST00000212090 257 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Olfr923-204ENSMUST00000219798 1068 ntBASIC8.51□□□□□ -1.05
Msh6P54276 CT025598.1-201ENSMUST00000225140 427 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Msh6P54276 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Msh6P54276 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Gm24695-201ENSMUST00000083877 83 ntBASIC8.51□□□□□ -1.05
Msh6P54276 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Msh6P54276 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Msh6P54276 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Msh6P54276 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Msh6P54276 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC8.5□□□□□ -1.05
Msh6P54276 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.5□□□□□ -1.05
Msh6P54276 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.5□□□□□ -1.05
Msh6P54276 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Msh6P54276 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Msh6P54276 Gm43421-201ENSMUST00000200044 2905 ntBASIC8.5□□□□□ -1.05
Msh6P54276 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Msh6P54276 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Msh6P54276 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Msh6P54276 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Msh6P54276 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Msh6P54276 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.5□□□□□ -1.05
Msh6P54276 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Msh6P54276 Gm26422-201ENSMUST00000104276 132 ntBASIC8.5□□□□□ -1.05
Msh6P54276 Gm14038-201ENSMUST00000121500 807 ntBASIC8.5□□□□□ -1.05
Msh6P54276 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Msh6P54276 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC8.5□□□□□ -1.05
Msh6P54276 Gm27152-201ENSMUST00000183828 99 ntBASIC8.5□□□□□ -1.05
Msh6P54276 Mir7211-201ENSMUST00000184071 63 ntBASIC8.5□□□□□ -1.05
Msh6P54276 Gm29234-201ENSMUST00000187452 1262 ntBASIC8.5□□□□□ -1.05
Msh6P54276 Gm36448-201ENSMUST00000199916 438 ntBASIC8.5□□□□□ -1.05
Msh6P54276 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.5□□□□□ -1.05
Msh6P54276 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC8.5□□□□□ -1.05
Msh6P54276 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Msh6P54276 CT009515.3-201ENSMUST00000226509 671 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms