Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sox3P53784 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox3P53784 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Sox3P53784 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sox3P53784 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Sox3P53784 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Gm15194-201ENSMUST00000120453 434 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Gm15349-201ENSMUST00000121154 204 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Gm12101-201ENSMUST00000121590 390 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Gm9672-201ENSMUST00000166437 425 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Gm8245-201ENSMUST00000182434 987 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox3P53784 Gm37322-201ENSMUST00000193409 337 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Gm9504-201ENSMUST00000196322 468 ntBASIC6.48□□□□□ -1.37
Sox3P53784 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.48□□□□□ -1.37
Sox3P53784 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.48□□□□□ -1.37
Sox3P53784 Gm4803-201ENSMUST00000218729 1279 ntBASIC6.48□□□□□ -1.37
Sox3P53784 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox3P53784 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Sox3P53784 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.48□□□□□ -1.37
Sox3P53784 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sox3P53784 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox3P53784 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.47□□□□□ -1.37
Sox3P53784 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sox3P53784 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sox3P53784 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sox3P53784 Gm11271-201ENSMUST00000116054 440 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm22194-201ENSMUST00000116869 95 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm5319-201ENSMUST00000118965 873 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm11553-201ENSMUST00000120682 240 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm23276-201ENSMUST00000157913 138 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm23896-201ENSMUST00000158109 130 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.47□□□□□ -1.37
Sox3P53784 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sox3P53784 Gm27210-201ENSMUST00000184263 402 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Mir7674-201ENSMUST00000184964 63 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm28527-201ENSMUST00000185210 297 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm28064-201ENSMUST00000185639 858 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm28416-201ENSMUST00000188334 292 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm29141-201ENSMUST00000190357 882 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm38097-201ENSMUST00000192936 439 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm38237-201ENSMUST00000193366 376 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm17965-201ENSMUST00000193904 517 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm19088-201ENSMUST00000198800 566 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm43459-201ENSMUST00000202093 331 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.47□□□□□ -1.37
Sox3P53784 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Gm2221-201ENSMUST00000209342 418 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm18562-201ENSMUST00000209949 915 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.47□□□□□ -1.37
Sox3P53784 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm4042-201ENSMUST00000216946 637 ntBASIC6.47□□□□□ -1.37
Sox3P53784 AC132446.1-201ENSMUST00000222655 226 ntBASIC6.47□□□□□ -1.37
Sox3P53784 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sox3P53784 Gm24451-201ENSMUST00000083353 133 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Gm10221-201ENSMUST00000088299 309 ntBASIC6.47□□□□□ -1.37
Sox3P53784 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sox3P53784 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Sox3P53784 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.47□□□□□ -1.37
Sox3P53784 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.47□□□□□ -1.37
Sox3P53784 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sox3P53784 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Sox3P53784 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Sox3P53784 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.46□□□□□ -1.37
Sox3P53784 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Sox3P53784 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms