Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.26□□□□□ -1.25
Shmt1P50431 Gm19186-201ENSMUST00000219922 333 ntBASIC7.26□□□□□ -1.25
Shmt1P50431 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.26□□□□□ -1.25
Shmt1P50431 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.26□□□□□ -1.25
Shmt1P50431 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Shmt1P50431 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Shmt1P50431 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Shmt1P50431 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Shmt1P50431 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Shmt1P50431 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC7.25□□□□□ -1.25
Shmt1P50431 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm13732-201ENSMUST00000117753 535 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm11553-201ENSMUST00000120682 240 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.25□□□□□ -1.25
Shmt1P50431 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm16298-201ENSMUST00000161107 420 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm10136-201ENSMUST00000183196 435 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 Gm28918-201ENSMUST00000188822 699 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm37383-201ENSMUST00000191750 745 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm8168-201ENSMUST00000209631 948 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
Shmt1P50431 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Shmt1P50431 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Shmt1P50431 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
Shmt1P50431 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Shmt1P50431 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Shmt1P50431 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC7.25□□□□□ -1.25
Shmt1P50431 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Shmt1P50431 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Shmt1P50431 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Shmt1P50431 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
Shmt1P50431 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
Shmt1P50431 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Shmt1P50431 Gm25317-201ENSMUST00000116824 129 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Gm14957-201ENSMUST00000121069 817 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Gm13462-201ENSMUST00000121472 961 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Gm12778-201ENSMUST00000122341 333 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.24□□□□□ -1.25
Shmt1P50431 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Shmt1P50431 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Shmt1P50431 Gm8524-201ENSMUST00000186232 379 ntBASIC7.24□□□□□ -1.25
Shmt1P50431 Gm43089-201ENSMUST00000199162 275 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms